Publications

Cancer medicine

Incidence of cardiovascular disease up to 13 year after cancer diagnosis: A matched cohort study among 32 757 cancer survivors.

01-10-2018

EMBO reports

Scientific honesty and publicly shared lab notebooks: Sharing lab notebooks along with publication would increase transparency and help to improve honesty when reporting results.

01-10-2018

British journal of cancer

Hierarchical clustering of activated proteins in the PI3K and MAPK pathways in ER-positive, HER2-negative breast cancer with potential therapeutic consequences.

01-10-2018

PLoS computational biology

Molecular characterization of breast and lung tumors by integration of multiple data types with functional sparse-factor analysis.

01-10-2018

EMBO reports

Active site alanine mutations convert deubiquitinases into high-affinity ubiquitin-binding proteins.

01-10-2018

European journal of cancer (Oxford, England : 1990)

Adjuvant dose-dense doxorubicin-cyclophosphamide versus docetaxel-doxorubicin-cyclophosphamide for high-risk breast cancer: First results of the randomised MATADOR trial (BOOG 2004-04).

01-10-2018

European journal of vascular and endovascular surgery : the official journal of the European Society for Vascular Surgery

The Dutch Audit of Carotid Interventions: Transparency in Quality of Carotid Endarterectomy in Symptomatic Patients in the Netherlands.

01-10-2018

Nature communications

Persistent repair intermediates induce senescence.

25-09-2018

Cancer research

A Transcriptome-Wide Association Study Among 97,898 Women to Identify Candidate Susceptibility Genes for Epithelial Ovarian Cancer Risk.

15-09-2018

BMC cancer

Early cost-effectiveness of tumor infiltrating lymphocytes (TIL) for second line treatment in advanced melanoma: a model-based economic evaluation.

15-09-2018

JMIR research protocols

Fertility Among Female Survivors of Childhood, Adolescent, and Young Adult Cancer: Protocol for Two Pan-European Studies (PanCareLIFE).

14-09-2018

The Journal of biological chemistry

Lysophosphatidic acid produced by autotaxin acts as an allosteric modulator of its catalytic efficiency.

14-09-2018

The EMBO journal

Queuing up the ribosome: nutrition and the microbiome control protein synthesis.

14-09-2018

Public health genomics

Recall and Retention of Consent Procedure Contents and Decisions: Results of a Randomized Controlled Trial.

11-09-2018

BMJ open

Rationale and design of a cohort study on primary ovarian insufficiency in female survivors of Hodgkin's lymphoma: influence on long-term adverse effects (SOPHIA).

11-09-2018

Current biology : CB

Loss of Kif18A Results in Spindle Assembly Checkpoint Activation at Microtubule-Attached Kinetochores.

10-09-2018

BMC cancer

CRITICS-II: a multicentre randomised phase II trial of neo-adjuvant chemotherapy followed by surgery versus neo-adjuvant chemotherapy and subsequent chemoradiotherapy followed by surgery versus neo-adjuvant chemoradiotherapy followed by surgery in resectable gastric cancer.

10-09-2018

BMC cancer

Light therapy as a treatment of cancer-related fatigue in (non-)Hodgkin lymphoma survivors (SPARKLE trial): study protocol of a multicenter randomized controlled trial.

10-09-2018

Cell

Generation of Tumor-Reactive T Cells by Co-culture of Peripheral Blood Lymphocytes and Tumor Organoids.

06-09-2018

Nucleic acids research

peakC: a flexible, non-parametric peak calling package for 4C and Capture-C data.

06-09-2018

Journal of pharmaceutical and biomedical analysis

Development and validation of a liquid chromatography-tandem mass spectrometry assay for the quantification of lurbinectedin in human plasma and urine.

05-09-2018

The Journal of urology

Shared Decision Making in Prostate Cancer Care-Encouraging Every Patient to be Actively Involved in Decision Making or Ensuring the Patient Preferred Level of Involvement?

01-09-2018

European urology focus

Comprehensive Assessment of Indocyanine Green Usage: One Tracer, Multiple Urological Applications.

01-09-2018

IUCrJ

Homology-based loop modeling yields more complete crystallographic protein structures.

01-09-2018

Cancer treatment reviews

Systematic review and meta-analysis of distance-based physical activity interventions for cancer survivors (2013-2018): We still haven't found what we're looking for.

01-09-2018

Histopathology

Digital image analysis improves precision of PD-L1 scoring in cutaneous melanoma.

01-09-2018

Critical reviews in oncology/hematology

Imaging predictors of treatment outcomes in rectal cancer: An overview.

01-09-2018

Gastroenterology

World Endoscopy Organization Consensus Statements on Post-Colonoscopy and Post-Imaging Colorectal Cancer.

01-09-2018

NMR in biomedicine

Impact of contrast agent injection duration on dynamic contrast-enhanced MRI quantification in prostate cancer.

01-09-2018

Bioinformatics (Oxford, England)

Comparative Network Reconstruction using mixed integer programming.

01-09-2018

Trends in molecular medicine

An Experimenter's Guide to Glioblastoma Invasion Pathways.

01-09-2018

European journal of cancer (Oxford, England : 1990)

The EORTC CAT Core-The computer adaptive version of the EORTC QLQ-C30 questionnaire.

01-09-2018

Urologic oncology

Neoadjuvant treatment for muscle-invasive bladder cancer: The past, the present, and the future.

01-09-2018

Brain connectivity

Brain Hyperconnectivity >10 Years After Cisplatin-Based Chemotherapy for Testicular Cancer.

01-09-2018

Analytical and bioanalytical chemistry

Quantification of total dinutuximab concentrations in neuroblastoma patients with liquid chromatography tandem mass spectrometry.

01-09-2018

Cardiovascular and interventional radiology

⁹⁰Y Resin Microspheres Radioembolization for Colon Cancer Liver Metastases Using Full-Strength Contrast Material.

01-09-2018

Cancer immunology, immunotherapy : CII

Targeting tumor-associated acidity in cancer immunotherapy.

01-09-2018

Acta oncologica (Stockholm, Sweden)

DW-MRI and DCE-MRI are of complementary value in predicting pathologic response to neoadjuvant chemoradiotherapy for esophageal cancer.

01-09-2018

Cancer chemotherapy and pharmacology

Metabolite profiling of the novel anti-cancer agent, plitidepsin, in urine and faeces in cancer patients after administration of ¹⁴C-plitidepsin.

01-09-2018

European journal of cancer (Oxford, England : 1990)

Breast cancer-related deaths according to grade in ductal carcinoma in situ: A Dutch population-based study on patients diagnosed between 1999 and 2012.

01-09-2018

The Journal of pathology

BRCA1-associated mammary tumorigenesis is dependent on estrogen rather than progesterone signaling.

01-09-2018

European journal of cancer (Oxford, England : 1990)

Outcomes by line of therapy and programmed death ligand 1 expression in patients with advanced melanoma treated with pembrolizumab or ipilimumab in KEYNOTE-006: A randomised clinical trial.

01-09-2018

The British journal of radiology

The influence of endorectal filling on rectal cancer staging with MRI.

01-09-2018

Acta oncologica (Stockholm, Sweden)

Patient characteristics and treatment considerations in pancreatic cancer: a population based study in the Netherlands.

01-09-2018

Bioinformatics (Oxford, England)

iTOP: inferring the topology of omics data.

01-09-2018

The Journal of clinical investigation

Neuropilin-1 upregulation elicits adaptive resistance to oncogene-targeted therapies.

31-08-2018

EJNMMI research

Dosimetry methods and clinical applications in peptide receptor radionuclide therapy for neuroendocrine tumours: a literature review.

29-08-2018

Cell reports

Nuclear Receptor Nur77 Limits the Macrophage Inflammatory Response through Transcriptional Reprogramming of Mitochondrial Metabolism.

21-08-2018

BMC Bioinformatics

Rscreenorm: normalization of CRISPR and siRNA screen data for more reproducible hit selection

20-08-2018

Journal of clinical oncology : official journal of the American Society of Clinical Oncology

Risk of Solid Cancer After Treatment of Testicular Germ Cell Cancer in the Platinum Era.

20-08-2018

Incidence of cardiovascular disease up to 13 year after cancer diagnosis: A matched cohort study among 32 757 cancer survivors.

Scientific honesty and publicly shared lab notebooks: Sharing lab notebooks along with publication would increase transparency and help to improve honesty when reporting results.

Hierarchical clustering of activated proteins in the PI3K and MAPK pathways in ER-positive, HER2-negative breast cancer with potential therapeutic consequences.

Molecular characterization of breast and lung tumors by integration of multiple data types with functional sparse-factor analysis.

Active site alanine mutations convert deubiquitinases into high-affinity ubiquitin-binding proteins.

Adjuvant dose-dense doxorubicin-cyclophosphamide versus docetaxel-doxorubicin-cyclophosphamide for high-risk breast cancer: First results of the randomised MATADOR trial (BOOG 2004-04).

The Dutch Audit of Carotid Interventions: Transparency in Quality of Carotid Endarterectomy in Symptomatic Patients in the Netherlands.

Persistent repair intermediates induce senescence.

A Transcriptome-Wide Association Study Among 97,898 Women to Identify Candidate Susceptibility Genes for Epithelial Ovarian Cancer Risk.

Early cost-effectiveness of tumor infiltrating lymphocytes (TIL) for second line treatment in advanced melanoma: a model-based economic evaluation.

Fertility Among Female Survivors of Childhood, Adolescent, and Young Adult Cancer: Protocol for Two Pan-European Studies (PanCareLIFE).

Lysophosphatidic acid produced by autotaxin acts as an allosteric modulator of its catalytic efficiency.

Queuing up the ribosome: nutrition and the microbiome control protein synthesis.

Recall and Retention of Consent Procedure Contents and Decisions: Results of a Randomized Controlled Trial.

Rationale and design of a cohort study on primary ovarian insufficiency in female survivors of Hodgkin's lymphoma: influence on long-term adverse effects (SOPHIA).

Loss of Kif18A Results in Spindle Assembly Checkpoint Activation at Microtubule-Attached Kinetochores.

CRITICS-II: a multicentre randomised phase II trial of neo-adjuvant chemotherapy followed by surgery versus neo-adjuvant chemotherapy and subsequent chemoradiotherapy followed by surgery versus neo-adjuvant chemoradiotherapy followed by surgery in resectable gastric cancer.

Light therapy as a treatment of cancer-related fatigue in (non-)Hodgkin lymphoma survivors (SPARKLE trial): study protocol of a multicenter randomized controlled trial.

Generation of Tumor-Reactive T Cells by Co-culture of Peripheral Blood Lymphocytes and Tumor Organoids.

peakC: a flexible, non-parametric peak calling package for 4C and Capture-C data.

Development and validation of a liquid chromatography-tandem mass spectrometry assay for the quantification of lurbinectedin in human plasma and urine.

Shared Decision Making in Prostate Cancer Care-Encouraging Every Patient to be Actively Involved in Decision Making or Ensuring the Patient Preferred Level of Involvement?

Comprehensive Assessment of Indocyanine Green Usage: One Tracer, Multiple Urological Applications.

Homology-based loop modeling yields more complete crystallographic protein structures.

Systematic review and meta-analysis of distance-based physical activity interventions for cancer survivors (2013-2018): We still haven't found what we're looking for.

Digital image analysis improves precision of PD-L1 scoring in cutaneous melanoma.

Imaging predictors of treatment outcomes in rectal cancer: An overview.

World Endoscopy Organization Consensus Statements on Post-Colonoscopy and Post-Imaging Colorectal Cancer.

Impact of contrast agent injection duration on dynamic contrast-enhanced MRI quantification in prostate cancer.

Comparative Network Reconstruction using mixed integer programming.

An Experimenter's Guide to Glioblastoma Invasion Pathways.

The EORTC CAT Core-The computer adaptive version of the EORTC QLQ-C30 questionnaire.

Neoadjuvant treatment for muscle-invasive bladder cancer: The past, the present, and the future.

Brain Hyperconnectivity >10 Years After Cisplatin-Based Chemotherapy for Testicular Cancer.

Quantification of total dinutuximab concentrations in neuroblastoma patients with liquid chromatography tandem mass spectrometry.

90Y Resin Microspheres Radioembolization for Colon Cancer Liver Metastases Using Full-Strength Contrast Material.

Targeting tumor-associated acidity in cancer immunotherapy.

DW-MRI and DCE-MRI are of complementary value in predicting pathologic response to neoadjuvant chemoradiotherapy for esophageal cancer.

Metabolite profiling of the novel anti-cancer agent, plitidepsin, in urine and faeces in cancer patients after administration of 14C-plitidepsin.

Breast cancer-related deaths according to grade in ductal carcinoma in situ: A Dutch population-based study on patients diagnosed between 1999 and 2012.

BRCA1-associated mammary tumorigenesis is dependent on estrogen rather than progesterone signaling.

Outcomes by line of therapy and programmed death ligand 1 expression in patients with advanced melanoma treated with pembrolizumab or ipilimumab in KEYNOTE-006: A randomised clinical trial.

The influence of endorectal filling on rectal cancer staging with MRI.

Patient characteristics and treatment considerations in pancreatic cancer: a population based study in the Netherlands.

iTOP: inferring the topology of omics data.

Neuropilin-1 upregulation elicits adaptive resistance to oncogene-targeted therapies.

Dosimetry methods and clinical applications in peptide receptor radionuclide therapy for neuroendocrine tumours: a literature review.

Nuclear Receptor Nur77 Limits the Macrophage Inflammatory Response through Transcriptional Reprogramming of Mitochondrial Metabolism.

Rscreenorm: normalization of CRISPR and siRNA screen data for more reproducible hit selection

Risk of Solid Cancer After Treatment of Testicular Germ Cell Cancer in the Platinum Era.

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⁹⁰Y Resin Microspheres Radioembolization for Colon Cancer Liver Metastases Using Full-Strength Contrast Material.

Metabolite profiling of the novel anti-cancer agent, plitidepsin, in urine and faeces in cancer patients after administration of ¹⁴C-plitidepsin.